You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 431 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.175200 pi(C): 0.258950 pi(G): 0.327600 pi(T): 0.238250 0.505793 -9043.747444 1.276173 -9043.177076 3.072370 -9033.893275 5.823718 -9030.901681 10.519287 -9029.756545 15.211539 -9029.372242 18.784479 -9029.244945 20.675797 -9029.112804 20.703692 -9029.112804 22.680166 -9028.442143 Overall Time for 1 Inference 22.694729 Likelihood : -9028.442143 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data4.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data4.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data4.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data4.phy_RAXML