You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 285 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.180500 pi(C): 0.218150 pi(G): 0.334550 pi(T): 0.266800 0.225242 -4694.983812 0.686696 -4694.983812 1.814018 -4684.767618 3.074597 -4681.137093 5.102143 -4679.724470 7.193535 -4679.366153 8.917734 -4679.167300 9.977611 -4679.077422 9.996797 -4679.077422 11.270827 -4676.379961 Overall Time for 1 Inference 11.286135 Likelihood : -4676.379961 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data44.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data44.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data44.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data44.phy_RAXML