You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 440 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.174950 pi(C): 0.239950 pi(G): 0.333900 pi(T): 0.251200 0.530654 -10259.113415 1.208357 -10239.098585 2.914900 -10226.543502 5.506103 -10220.075823 9.293701 -10219.183560 13.155014 -10218.925512 16.528009 -10218.825638 18.742449 -10218.741151 18.771375 -10218.741151 20.551632 -10218.232573 Overall Time for 1 Inference 20.566333 Likelihood : -10218.232573 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data50.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data50.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data50.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data50.phy_RAXML