You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 400 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.184300 pi(C): 0.242700 pi(G): 0.325200 pi(T): 0.247800 0.464920 -8424.248843 1.034051 -8424.248843 2.404880 -8416.843344 4.690925 -8413.553476 7.962087 -8412.993131 11.219404 -8412.672631 13.943293 -8412.565316 16.326913 -8412.450490 17.787840 -8412.450490 19.449569 -8412.230110 Overall Time for 1 Inference 19.463818 Likelihood : -8412.230110 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data51.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data51.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data51.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data51.phy_RAXML