You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 402 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.147600 pi(C): 0.234200 pi(G): 0.346750 pi(T): 0.271450 0.430800 -8169.921997 1.143623 -8164.532323 2.912650 -8153.389631 5.230442 -8150.723726 8.535609 -8149.873979 11.661487 -8149.540602 13.139832 -8149.448981 13.165294 -8149.448981 14.783236 -8147.922989 Overall Time for 1 Inference 14.798099 Likelihood : -8147.922989 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data52.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data52.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data52.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data52.phy_RAXML