You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 429 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.171050 pi(C): 0.257400 pi(G): 0.315100 pi(T): 0.256450 0.599169 -9565.913813 1.285533 -9559.912368 3.091163 -9550.239568 6.012122 -9546.497480 9.922649 -9545.479139 13.927644 -9545.231514 17.498928 -9544.958810 20.216416 -9544.871465 20.244102 -9544.871465 22.232194 -9544.071456 Overall Time for 1 Inference 22.246763 Likelihood : -9544.071456 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data53.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data53.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data53.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data53.phy_RAXML