You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 443 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.180450 pi(C): 0.226000 pi(G): 0.348400 pi(T): 0.245150 0.503866 -10601.692862 1.205344 -10601.692862 2.971601 -10592.405353 5.589440 -10587.258191 9.659123 -10586.008284 13.713577 -10585.781661 17.684193 -10585.696329 21.463070 -10585.625696 23.713949 -10585.567516 23.744178 -10585.567516 25.677432 -10585.316809 Overall Time for 1 Inference 25.691946 Likelihood : -10585.316809 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data61.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data61.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data61.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data61.phy_RAXML