You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 407 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.176850 pi(C): 0.242350 pi(G): 0.311550 pi(T): 0.269250 0.514807 -8090.408718 1.150006 -8083.936579 2.783866 -8076.777173 5.391902 -8074.622691 8.950257 -8074.174020 12.574356 -8073.971673 15.722511 -8073.891001 17.891672 -8073.821424 17.917646 -8073.821424 19.688466 -8073.403452 Overall Time for 1 Inference 19.705876 Likelihood : -8073.403452 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data63.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data63.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data63.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data63.phy_RAXML