You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 462 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.189300 pi(C): 0.229100 pi(G): 0.338800 pi(T): 0.242800 0.530468 -12159.679928 1.259671 -12154.899512 3.177263 -12143.948646 6.105766 -12141.077658 10.550363 -12140.280502 14.930193 -12140.045149 18.402385 -12139.960301 21.292204 -12139.892580 22.663605 -12139.892580 24.583191 -12139.733395 Overall Time for 1 Inference 24.597602 Likelihood : -12139.733395 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data65.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data65.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data65.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data65.phy_RAXML