You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 442 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.178700 pi(C): 0.234950 pi(G): 0.329000 pi(T): 0.257350 0.539605 -10464.834497 1.155668 -10464.834497 2.832397 -10455.294487 5.332514 -10452.820835 9.265330 -10451.905796 12.452881 -10451.658510 15.262993 -10451.566948 15.290793 -10451.566948 17.086127 -10451.194816 Overall Time for 1 Inference 17.101371 Likelihood : -10451.194816 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data66.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data66.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data66.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data66.phy_RAXML