You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 385 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.188550 pi(C): 0.229350 pi(G): 0.331900 pi(T): 0.250200 0.498128 -7835.346762 1.210223 -7809.336346 2.830617 -7803.639221 4.926559 -7801.589785 8.143193 -7800.542648 11.404462 -7800.302598 14.264549 -7800.142877 15.891588 -7800.076221 15.916183 -7800.076221 17.481544 -7799.825527 Overall Time for 1 Inference 17.496159 Likelihood : -7799.825527 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data67.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data67.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data67.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data67.phy_RAXML