You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 366 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.175100 pi(C): 0.231600 pi(G): 0.336150 pi(T): 0.257150 0.443023 -6804.049890 1.027987 -6795.884928 2.458251 -6784.224795 4.858442 -6778.751196 8.204297 -6777.563251 11.422565 -6777.065363 13.954177 -6776.963176 16.118833 -6776.814847 16.565580 -6776.814847 18.217940 -6775.095454 Overall Time for 1 Inference 18.233036 Likelihood : -6775.095454 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data77.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data77.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data77.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data77.phy_RAXML