You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 418 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.197650 pi(C): 0.265900 pi(G): 0.288250 pi(T): 0.248200 0.462901 -8402.140751 1.204483 -8397.549463 2.953328 -8389.411610 5.472104 -8385.383286 9.053199 -8384.651392 12.640990 -8384.379685 15.749134 -8384.283952 17.738204 -8384.208447 17.765281 -8384.208447 19.564383 -8384.070769 Overall Time for 1 Inference 19.579244 Likelihood : -8384.070769 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data78.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data78.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data78.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data78.phy_RAXML