You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 401 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.203600 pi(C): 0.215700 pi(G): 0.339550 pi(T): 0.241150 0.444460 -7955.827706 1.122148 -7955.827706 2.802364 -7943.684581 4.954767 -7939.247914 8.466269 -7938.158104 12.013049 -7937.768059 15.211823 -7937.510049 16.718265 -7937.418263 16.743560 -7937.418263 18.510745 -7936.322874 Overall Time for 1 Inference 18.527752 Likelihood : -7936.322874 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data88.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data88.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data88.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data88.phy_RAXML