IMPORTANT WARNING: Sequences Tax36 and Tax37 are exactly identical

IMPORTANT WARNING
Found 1 sequence that is exactly identical to other sequences in the alignment.
Normally they should be excluded from the analysis.

Just in case you might need it, an alignment file with 
sequence duplicates removed is printed to file /auto/dufayard/res/simu_raxml/data89.phy.reduced


You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008

Alignment has 394 distinct alignment patterns

Proportion of gaps and completely undetermined characters in this alignment: 0.000000

RAxML rapid hill-climbing mode

Executing 1 inference on the original alignment using a distinct randomized MP tree

All free model parameters will be estimated by RAxML
GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter
GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units

Partition: 0
Name: No Name Provided
DataType: DNA
Substitution Matrix: GTR
Empirical Base Frequencies:
pi(A): 0.159050 pi(C): 0.273200 pi(G): 0.279500 pi(T): 0.288250



0.422223 -7590.489017
1.137711 -7589.797258
2.830647 -7583.562053
5.090401 -7581.017662
8.203608 -7580.415415
11.371802 -7580.161657
14.426563 -7580.070662
17.726231 -7579.971548
19.353311 -7579.908750
19.382280 -7579.908750
21.033041 -7579.622682


Overall Time for 1 Inference 21.047385
Likelihood   : -7579.622682


Parsimony starting tree written to:    /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data89.phy_RAXML
Final tree written to:                 /auto/dufayard/res/simu_raxml/./RAxML_result.data89.phy_RAXML
Execution Log File written to:         /auto/dufayard/res/simu_raxml/./RAxML_log.data89.phy_RAXML
Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data89.phy_RAXML