You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 415 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.192700 pi(C): 0.246500 pi(G): 0.306800 pi(T): 0.254000 0.458645 -9317.611016 1.217605 -9311.668078 2.944897 -9302.440846 5.710365 -9295.198815 9.307357 -9293.652107 12.967060 -9293.218456 16.683204 -9292.966226 19.602644 -9292.874528 21.512741 -9292.734383 21.539690 -9292.734383 23.409010 -9292.231317 Overall Time for 1 Inference 23.423992 Likelihood : -9292.231317 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data95.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data95.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data95.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data95.phy_RAXML