You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 437 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.168150 pi(C): 0.248900 pi(G): 0.307700 pi(T): 0.275250 0.642785 -9325.155592 1.385113 -9323.357019 3.179796 -9313.587456 6.155736 -9309.071593 10.330025 -9307.827425 14.348178 -9307.405499 17.992495 -9307.303750 20.264404 -9307.213420 20.294295 -9307.213420 22.382799 -9306.491840 Overall Time for 1 Inference 22.397569 Likelihood : -9306.491840 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data96.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data96.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data96.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data96.phy_RAXML