PhyML with Smart Model Selection

Authors : Vincent Lefort, Jean-Emmanuel Longueville and Olivier Gascuel

PhyML now includes automatic model selection. SMS can also be used on its own.

Input Data
Sequences
(PHYLIP format)
File Example (AA file) (DNA file)
(from Phylogenetic Handbook)
Data Type DNA Amino-Acids

Substitution Model

Tree Searching
Starting tree(s) File BIONJ
Type of tree improvement
Number of random starting tree yes no

Branch Support
Fast likelihood-based method Use aLRT or aBayes to save computing time yes no
Perform bootstrap yes no

Name of your analysis
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