Accounting for Solvent Accessibility and Secondary Structure in Protein Phylogenetics is Highly Beneficial.
Le S.Q., Gascuel O.
Systematic Biology, 59(3): 277-287, 2010
Paper
Online appendix (pdf):
- GTR rate matrices
- Comparison of CONF/LG, PART and MIX
- Experiments with PASSML
Contacts
For any question about the algorithm, the program options or the source code, please contact:
-
Olivier Gascuel
(author)
LIRMM, Montpellier, France.
-
Si Quang Le
(author)
Wellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom.