WAVES: a Web Application for Versatile Enhanced Bioinformatic Services
Marc Chakiachvili, Sylvain Milanesi, Anne-Muriel Arigon Chifolleau, Vincent Lefort
Preprint available on bioRXiv.
WAVES Workshops
We organize workshops to train users to WAVES.These trainings are intended for bioinformaticians interested in installing and using WAVES.
WAVES training program
- 09:30 - 10:00 : Introduction to WAVES
- 10:00 - 10:30 : Testing a pre-configured WAVES instance
- 10:30 - 11:00 : Break
- 11:00 - 12:00 : WAVES installation & configuration
- 12:00 - 13:30 : Lunch
- 13:30 - 14:00 : Interfacing WAVES with Galaxy
- 14:00 - 15:30 : WAVES REST API & remote tool integration
- 15:30 - 16:00 : Integrating WAVES web form into remote web server with PHP
Prerequisites
For the smooth running of the training, you will need:- A computer under Linux system with a sudoer acount
- An internet access
- A recent web browser
- A 'ssh' access on a computing cluster with a user account able to run a job
- Some applications:
- git
- virtualenv
- Python 2.7
- pip
- Singularity
- An account on a Galaxy instance remotely available
Scheduled trainings
- October 23, 2018 : PRABI (Lyon)
- December 18, 2018 : Institut Pasteur (Paris)
- March 11, 2019 : Bilille (Lille)
Contact: Vincent Lefort, LIRMM.
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