Gk-arrays: Querying large read collections in main memory: a versatile data structure.
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Gk-arrays source code is distributed under the GPL-compliant
CeCILL-C license.
Source code
Debian/Ubuntu package
A very simple test file can be downloaded from
here.
Once the library is installed, you can compile it using
e.g. g++ -Wall -pedantic -O3 -lGkArrays testGkArrays.cpp -o testGkArrays
.
Another test file (measuring the query time) is also included in the source code under the
src
directory.