SDM: a Fast Distance-based Approach for (Super)Tree Building in Phylogenomics.

Criscuolo A., Berry V., Douzery E.J.P., Gascuel O. Systematic Biology. 2006 55(5):740-755.

Please cite THIS paper if you use SDM.

Phylogenomic datasets

All the simulated datasets we have used to assess SDM can be downloaded from this web page. These datasets mimic phylogenomic, multi-gene data. They are composed of trees and gene collections. Trees are randomly generated. Each gene collection contains k genes. Gene sequences have been generated by evolving random ancestral sequences along the trees.
All files are compressed. With Windows, simply use your favorite compression software to decompress them. With UNIX you have to use the following instruction:
gunzip directoryXXX.tar.gz ; tar -xvvf directoryXXX.tar ;
and the following directory will be created: directoryXXX/.

SDM datasets

See also PhyD* datasets.