SDM: a Fast Distance-based Approach for (Super)Tree Building in Phylogenomics.

Paper

• If you use SDM, please cite:
  
  "SDM: a Fast Distance-based Approach for (Super)Tree Building in Phylogenomics."
  Criscuolo A., Berry V., Douzery E.J.P., Gascuel O.
  Systematic Biology. 2006 55(5):740-755.

Related paper

• "Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle."
  Desper R., Gascuel O.
  Journal of Computational Biology. 2002 9(5):687-705.

References

• "PHYLIP: Phylogeny inference package, version 3.6b."
  Felsenstein J.
  Distributed by the author. University of Washinton, Seattle.
• "An alternating least-squares approach to inferring phylogenies."
  Felsenstein J.
  Systematic Biology. 1997 46:101-111.
• "The average consensus precedure: combination of weighted trees containing identical or overlapping sets of taxa."
  Lapointe F.J., Cucumel G.
  Systematic Biology. 1997 46:306-312.
• "T-REX: reconstructing and visualizing phylogenetic trees and reticulation networks."
  Makarenkov V.
  Bioinformatics. 2001 17:664-668.

Contacts

• Alexis Criscuolo (author)
  LIRMM, Montpellier, France.
  Web page: http://www.lirmm.fr/~criscuol/
• Olivier Gascuel (author)
  LIRMM, Montpellier, France.