PhyML 3.0: new algorithms, methods and utilities

Please cite:
"New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0."
Guindon S., Dufayard J.F., Lefort V., Anisimova M., Hordijk W., Gascuel O.
Systematic Biology, 59(3):307-21, 2010.

PhyML is available on GitHub.


Download PhyML binaries

Click here to download the binaries
The binaries you have compiled on various Mac, Windows or LINUX systems are much welcome (Stéphane Guindon) and will be displayed on this web page.