PhyML 3.0: new algorithms, methods and utilities
Guindon S., Dufayard J.F., Lefort V., Anisimova M., Hordijk W., Gascuel O.
Systematic Biology, 59(3):307-21, 2010.
Get the latest PhyML releases from GitHub.
Papers
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PhyML 3.0:
Guindon S., Dufayard J.F., Lefort V., Anisimova M., Hordijk W., Gascuel O.
Systematic Biology, 59(3):307-21, 2010.
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SMS:
Vincent Lefort, Jean-Emmanuel Longueville, Olivier Gascuel.
Molecular Biology and Evolution, msx149, 2017.
Related papers
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aBayes:
Anisimova M., Gil M., Dufayard JF., Dessimoz C. and Gascuel O.
Systematic Biology, 60(5):685-99, 2011.
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LG model:
Le S.Q., Gascuel O.
Molecular Biology and Evolution, 25(7):1307-20, 2008.
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aLRT:
Anisimova M., Gascuel O.
Systematic Biology, 55(4), 539-552, 2006.
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SPR:
Hordijk W., Gascuel O.
Bioinformatics, 21(24), pp. 4338-4347, 2005.
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PhyML original version:
Guindon S., Gascuel O.
Systematic Biology, 52(5):696-704, 2003.
Contacts
For any question about the algorithm please contact:
The source code and documentation are available on this
repository.