| Configuration file | PHYML_2.4.5 | PHYML_3.0_NNI | PHYML_3.0_SPR | RAXML | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Proteic LogLks: | Average = 3.45 ; Median = 4.0 | Average = 2.65 ; Median = 3.0 | Average = 2.75 ; Median = 3.0 | Average = 1.14 ; Median = 1.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Proteic Times: | Average = 2.1 ; Median = 2.0 | Average = 2.15 ; Median = 2.5 | Average = 1.8 ; Median = 2.0 | Average = 3.95 ; Median = 4.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RF distance: | Average = 0.2437 | Average = 0.1957 | Average = 0.1828 | Average = 0.0
| Proteic #Delta>5.0: |
| 7.0
| 6.0
| 7.0
| 0.0
| Proteic #P-Value<0.05: |
| 3.0 |
3.0 |
0.0 |
0.0 |
proteic_M3756_77x11234_2008.phy |
| Time spent : 11h 6m 19s ; Time Rank =2.5 |
LogLk = -434862.668724 ; LogLK Rank =4.0 RF distance =0.324 SH with best : P-value = 0.0 ; Output Time spent : 12h 27m 17s ; Time Rank =2.5 |
LogLk = -434836.083826 ; LogLK Rank =3.0 RF distance =0.297 SH with best : P-value = 0.0 ; Output Time spent : 7h 57m 41s ; Time Rank =1.0 |
LogLk = -434638.643156 ; LogLK Rank =2.0 RF distance =0.216 SH with best : P-value = 0.078 ; Output Time spent : 38h 48m 35s ; Time Rank =4.0 |
LogLk = -434538.185117 ; LogLK Rank =1.0 RF distance =0.0 Output proteic_M2883_91x7386_2007.phy |
| Time spent : 3h 4m 27s ; Time Rank =2.0 |
LogLk = -156937.11549 ; LogLK Rank =3.0 RF distance =0.09 SH with best : P-value = 0.937 ; Output Time spent : 2h 49m 1s ; Time Rank =2.0 |
LogLk = -156937.11611 ; LogLK Rank =3.0 RF distance =0.09 SH with best : P-value = 0.94 ; Output Time spent : 2h 45m 23s ; Time Rank =2.0 |
LogLk = -156937.115938 ; LogLK Rank =3.0 RF distance =0.09 SH with best : P-value = 0.937 ; Output Time spent : 12h 7m 15s ; Time Rank =4.0 |
LogLk = -156933.21419 ; LogLK Rank =1.0 RF distance =0.0 Output proteic_M3755_77x9918_2008.phy |
| Time spent : 8h 17m 31s ; Time Rank =2.0 |
LogLk = -361736.713475 ; LogLK Rank =4.0 RF distance =0.472 SH with best : P-value = 0.0 ; Output Time spent : 12h 25m 35s ; Time Rank =3.0 |
LogLk = -361707.747854 ; LogLK Rank =3.0 RF distance =0.378 SH with best : P-value = 0.0 ; Output Time spent : 4h 29m 54s ; Time Rank =1.0 |
LogLk = -361367.683563 ; LogLK Rank =2.0 RF distance =0.243 SH with best : P-value = 0.794 ; Output Time spent : 28h 1m 51s ; Time Rank =4.0 |
LogLk = -361351.506667 ; LogLK Rank =1.0 RF distance =0.0 Output proteic_M2577_40x12260_2005.phy |
| Time spent : 3h 17m 37s ; Time Rank =2.0 |
LogLk = -339907.768717 ; LogLK Rank =3.0 RF distance =0.108 SH with best : P-value = 0.466 ; Output Time spent : 4h 38m 29s ; Time Rank =3.0 |
LogLk = -339907.773852 ; LogLK Rank =3.0 RF distance =0.108 SH with best : P-value = 0.479 ; Output Time spent : 2h 24m 39s ; Time Rank =1.0 |
LogLk = -339907.785857 ; LogLK Rank =3.0 RF distance =0.108 SH with best : P-value = 0.466 ; Output Time spent : 10h 2m 58s ; Time Rank =4.0 |
LogLk = -339872.601005 ; LogLK Rank =1.0 RF distance =0.0 Output proteic_M2580_40x12034_2005.phy |
| Time spent : 1h 55m 16s ; Time Rank =2.5 |
LogLk = -403949.903512 ; LogLK Rank =2.5 RF distance =0.0 SH with best : P-value = 1.0 ; Output Time spent : 2h 15m 48s ; Time Rank =2.5 |
LogLk = -403949.903987 ; LogLK Rank =2.5 RF distance =0.0 SH with best : P-value = 1.0 ; Output Time spent : 1h 23m 14s ; Time Rank =1.0 |
LogLk = -403949.903852 ; LogLK Rank =2.5 RF distance =0.0 SH with best : P-value = 1.0 ; Output Time spent : 6h 28m 18s ; Time Rank =4.0 |
LogLk = -403949.903412 ; LogLK Rank =2.5 RF distance =0.0 Output proteic_M3497_105x899_2007.phy |
| Time spent : 40m 55s ; Time Rank =1.0 |
LogLk = -85045.302812 ; LogLK Rank =4.0 RF distance =0.147 SH with best : P-value = 0.601 ; Output Time spent : 57m 39s ; Time Rank =2.5 |
LogLk = -85040.818715 ; LogLK Rank =3.0 RF distance =0.127 SH with best : P-value = 0.686 ; Output Time spent : 1h 42s ; Time Rank =2.5 |
LogLk = -85037.180301 ; LogLK Rank =2.0 RF distance =0.117 SH with best : P-value = 0.773 ; Output Time spent : 2h 39m 48s ; Time Rank =4.0 |
LogLk = -85028.993874 ; LogLK Rank =1.0 RF distance =0.0 Output proteic_M2624_139x348_2006.phy |
| Time spent : 1h 23m 5s ; Time Rank =3.5 |
LogLk = -13238.447301 ; LogLK Rank =4.0 RF distance =0.441 SH with best : P-value = 0.0 ; Output Time spent : 1h 4m 44s ; Time Rank =1.5 |
LogLk = -13142.762463 ; LogLK Rank =3.0 RF distance =0.382 SH with best : P-value = 0.0 ; Output Time spent : 1h 7m 18s ; Time Rank =1.5 |
LogLk = -12857.931052 ; LogLK Rank =2.0 RF distance =0.22 SH with best : P-value = 0.303 ; Output Time spent : 1h 33m 39s ; Time Rank =3.5 |
LogLk = -12841.257034 ; LogLK Rank =1.0 RF distance =0.0 Output proteic_M3068_50x1000_2006.phy |
| Time spent : 19m 7s ; Time Rank =1.5 |
LogLk = -68156.036272 ; LogLK Rank =3.0 RF distance =0.191 SH with best : P-value = 0.628 ; Output Time spent : 18m 35s ; Time Rank =1.5 |
LogLk = -68155.338325 ; LogLK Rank =2.0 RF distance =0.17 SH with best : P-value = 0.627 ; Output Time spent : 23m 43s ; Time Rank =3.0 |
LogLk = -68162.99388 ; LogLK Rank =4.0 RF distance =0.17 SH with best : P-value = 0.453 ; Output Time spent : 1h 32m 33s ; Time Rank =4.0 |
LogLk = -68148.320134 ; LogLK Rank =1.0 RF distance =0.0 Output proteic_M2480_40x430_2005.phy |
| Time spent : 3m 19s ; Time Rank =2.0 |
LogLk = -23875.659434 ; LogLK Rank =3.0 RF distance =0.243 SH with best : P-value = 0.819 ; Output Time spent : 3m 33s ; Time Rank =2.0 |
LogLk = -23871.279362 ; LogLK Rank =2.0 RF distance =0.054 SH with best : P-value = 0.938 ; Output Time spent : 3m 41s ; Time Rank =2.0 |
LogLk = -23877.339434 ; LogLK Rank =4.0 RF distance =0.243 SH with best : P-value = 0.78 ; Output Time spent : 21m 34s ; Time Rank =4.0 |
LogLk = -23870.363017 ; LogLK Rank =1.0 RF distance =0.0 Output proteic_M1992_46x68_2004.phy |
| Time spent : 1m 12s ; Time Rank =2.0 |
LogLk = -2925.302532 ; LogLK Rank =4.0 RF distance =0.418 SH with best : P-value = 0.581 ; Output Time spent : 51s ; Time Rank =1.0 |
LogLk = -2921.395934 ; LogLK Rank =2.0 RF distance =0.348 SH with best : P-value = 0.849 ; Output Time spent : 2m 2s ; Time Rank =3.0 |
LogLk = -2922.273687 ; LogLK Rank =3.0 RF distance =0.418 SH with best : P-value = 0.802 ; Output Time spent : 4m 4s ; Time Rank =4.0 |
LogLk = -2920.45272 ; LogLK Rank =1.0 RF distance =0.0 Output Proteic LogLks: |
| Average = 3.45 ; Median = 4.0 |
Average = 2.65 ; Median = 3.0 |
Average = 2.75 ; Median = 3.0 |
Average = 1.14 ; Median = 1.0 |
Proteic Times: |
| Average = 2.1 ; Median = 2.0 |
Average = 2.15 ; Median = 2.5 |
Average = 1.8 ; Median = 2.0 |
Average = 3.95 ; Median = 4.0 |
RF distance: |
| Average = 0.2437
| Average = 0.1957
| Average = 0.1828
| Average = 0.0
| Proteic #Delta>5.0: |
| 7.0
| 6.0
| 7.0
| 0.0
| Proteic #P-Value<0.05: |
| 3.0 |
3.0 |
0.0 |
0.0 | |